Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS11750 | Not Available | Positive | 2766868 - 2767209 | 12789.7 |
| murein l,d-transpeptidase catalytic domain family protein | PHEP_RS11755 | Not Available | Positive | 2767353 - 2768066 | 26033.1 |
| tonb-dependent receptor plug domain-containing protein | PHEP_RS11760 | Not Available | Negative | 2768070 - 2770826 | 102651.0 |
| hypothetical protein | PHEP_RS11765 | Not Available | Negative | 2770880 - 2771095 | 8156.86 |
| numod1 domain-containing dna-binding protein | PHEP_RS11770 | Not Available | Positive | 2771443 - 2772183 | 27838.4 |
| fecr family protein | PHEP_RS11775 | Not Available | Positive | 2772469 - 2773707 | 46051.5 |
| srpbcc family protein | PHEP_RS11780 | Not Available | Positive | 2773805 - 2774251 | 16673.8 |
| hypothetical protein | PHEP_RS11785 | Not Available | Negative | 2774268 - 2775428 | 43125.5 |
| na+/h+ antiporter | PHEP_RS11790 | Not Available | Positive | 2775623 - 2777197 | 58503.9 |
| cytochrome-c peroxidase | PHEP_RS11795 | Not Available | Negative | 2777205 - 2778983 | 66902.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
