Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6266 family protein | PHEP_RS11700 | Not Available | Positive | 2756545 - 2757186 | 23465.3 |
| murein hydrolase activator envc family protein | PHEP_RS11705 | Not Available | Negative | 2757196 - 2758452 | 48056.9 |
| cysteine synthase cysm | PHEP_RS11710 | Not Available | Negative | 2758480 - 2759352 | 31862.2 |
| serine o-acetyltransferase epsc | PHEP_RS11715 | Not Available | Negative | 2759355 - 2760167 | 30413.8 |
| aminoacyl-histidine dipeptidase | PHEP_RS11720 | Not Available | Negative | 2760225 - 2761679 | 52805.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | PHEP_RS11725 | Not Available | Negative | 2761750 - 2763093 | 50301.5 |
| phosphatase pap2 family protein | PHEP_RS22440 | Not Available | Negative | 2763233 - 2763793 | 20505.9 |
| voc family protein | PHEP_RS11735 | Not Available | Negative | 2763859 - 2764266 | 15233.9 |
| llm class flavin-dependent oxidoreductase | PHEP_RS11740 | Not Available | Negative | 2764361 - 2765365 | 36586.7 |
| hypothetical protein | PHEP_RS11745 | Not Available | Positive | 2765531 - 2766574 | 41206.6 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
