Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asma-like c-terminal region-containing protein | PHEP_RS11600 | Not Available | Negative | 2727319 - 2729757 | 90315.4 |
| malate:quinone oxidoreductase | PHEP_RS11605 | Not Available | Negative | 2729945 - 2731438 | 54956.4 |
| m23 family metallopeptidase | PHEP_RS11610 | Not Available | Positive | 2731659 - 2732288 | 24293.7 |
| serine hydrolase | PHEP_RS11615 | Not Available | Negative | 2732303 - 2734714 | 89680.9 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | PHEP_RS11620 | Not Available | Negative | 2734817 - 2736253 | 52636.0 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS11625 | Not Available | Negative | 2736265 - 2739417 | 114380.0 |
| s9 family peptidase | PHEP_RS11630 | Not Available | Positive | 2739763 - 2741889 | 78105.8 |
| arac family transcriptional regulator | PHEP_RS11635 | Not Available | Negative | 2741922 - 2742821 | 34438.1 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS11640 | Not Available | Negative | 2742847 - 2743611 | 27065.4 |
| sdr family oxidoreductase | PHEP_RS11645 | Not Available | Negative | 2743644 - 2744522 | 31372.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
