Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine decarboxylase | PHEP_RS11500 | Not Available | Positive | 2701605 - 2702996 | 53993.4 |
| hypothetical protein | PHEP_RS11505 | Not Available | Positive | 2703330 - 2704280 | 36653.6 |
| pp2c family protein-serine/threonine phosphatase | PHEP_RS21640 | Not Available | Positive | 2704376 - 2705743 | 50278.4 |
| ftsw/roda/spove family cell cycle protein | PHEP_RS11515 | Not Available | Positive | 2705751 - 2709734 | 148300.0 |
| fha domain-containing protein | PHEP_RS11520 | Not Available | Positive | 2709742 - 2710539 | 30271.9 |
| serine/threonine protein kinase | PHEP_RS11525 | Not Available | Positive | 2710547 - 2712088 | 57047.8 |
| hsp20/alpha crystallin family protein | PHEP_RS11530 | Not Available | Negative | 2712147 - 2712581 | 16362.2 |
| acyl-coa thioesterase | PHEP_RS11535 | Not Available | Positive | 2712669 - 2713157 | 19203.1 |
| dihydroneopterin aldolase | PHEP_RS11540 | Not Available | Negative | 2713165 - 2713542 | 14361.4 |
| acyl-coa dehydrogenase family protein | PHEP_RS11545 | Not Available | Positive | 2713641 - 2714831 | 43829.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
