Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | PHEP_RS11450 | Not Available | Negative | 2688836 - 2689735 | 34426.0 |
| sugar mfs transporter | PHEP_RS11455 | Not Available | Negative | 2689819 - 2691234 | 51200.8 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS11460 | Not Available | Negative | 2691256 - 2692005 | 26839.1 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS11465 | Not Available | Negative | 2692039 - 2692797 | 26963.5 |
| smp-30/gluconolactonase/lre family protein | PHEP_RS11470 | Not Available | Negative | 2692991 - 2693878 | 33140.6 |
| ilvd/edd family dehydratase | PHEP_RS11475 | Not Available | Negative | 2693885 - 2695597 | 61323.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | PHEP_RS11480 | Not Available | Negative | 2696101 - 2697471 | 49595.0 |
| ai-2e family transporter | PHEP_RS11485 | Not Available | Positive | 2697566 - 2698699 | 41699.2 |
| arginine--trna ligase | PHEP_RS11490 | Not Available | Negative | 2698744 - 2700525 | 67210.8 |
| arginase | PHEP_RS11495 | Not Available | Negative | 2700549 - 2701499 | 34973.1 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
