Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor domain-containing protein | PHEP_RS01100 | Not Available | Negative | 259057 - 261549 | 92651.8 |
| atp-dependent clp protease adaptor clps | PHEP_RS01105 | Not Available | Negative | 261676 - 261957 | 10935.0 |
| 3-oxoacyl-acp synthase iii family protein | PHEP_RS01110 | Not Available | Positive | 262038 - 263084 | 38286.8 |
| sdr family oxidoreductase | PHEP_RS01115 | Not Available | Negative | 263088 - 263963 | 31266.6 |
| enoyl-coa hydratase/isomerase family protein | PHEP_RS01120 | Not Available | Negative | 263968 - 264729 | 27993.9 |
| tonb-dependent receptor plug domain-containing protein | PHEP_RS01125 | Not Available | Negative | 264738 - 267431 | 99225.5 |
| dctp deaminase | PHEP_RS01130 | Not Available | Negative | 267511 - 268047 | 19953.0 |
| 4'-phosphopantetheinyl transferase family protein | PHEP_RS01135 | Not Available | Positive | 268116 - 268757 | 24632.9 |
| lipoyl(octanoyl) transferase lipb | PHEP_RS01140 | Not Available | Positive | 268768 - 269463 | 26458.7 |
| duf5684 domain-containing protein | PHEP_RS01145 | Not Available | Positive | 269547 - 270032 | 17532.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
