Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3037 domain-containing protein | PHEP_RS11295 | Not Available | Negative | 2644979 - 2645362 | 14559.8 |
| hipa family kinase | PHEP_RS11300 | Not Available | Negative | 2645340 - 2646137 | 30089.2 |
| beta-n-acetylhexosaminidase | PHEP_RS11305 | Not Available | Negative | 2646204 - 2647793 | 60570.6 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | PHEP_RS11310 | Not Available | Negative | 2647807 - 2650206 | 89109.3 |
| duf5017 domain-containing protein | PHEP_RS11315 | Not Available | Negative | 2650259 - 2650654 | 14603.6 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS11320 | Not Available | Negative | 2650683 - 2652305 | 60261.6 |
| tonb-dependent receptor | PHEP_RS11325 | Not Available | Negative | 2652340 - 2655756 | 125787.0 |
| fecr family protein | PHEP_RS11330 | Not Available | Negative | 2656003 - 2657133 | 41902.9 |
| rna polymerase sigma factor | PHEP_RS11335 | Not Available | Negative | 2657225 - 2657812 | 22818.6 |
| lipocalin family protein | PHEP_RS11340 | Not Available | Positive | 2658203 - 2658520 | 11924.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
