Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PHEP_RS11240 | Not Available | Negative | 2634465 - 2634794 | 12545.1 |
| laci family dna-binding transcriptional regulator | PHEP_RS11250 | Not Available | Positive | 2635411 - 2636433 | 38582.9 |
| phosphotransferase enzyme family protein | PHEP_RS11255 | Not Available | Positive | 2636510 - 2637568 | 40961.0 |
| hypothetical protein | PHEP_RS11260 | Not Available | Positive | 2637605 - 2638039 | 16785.1 |
| nadp-dependent glyceraldehyde-3-phosphate dehydrogenase | PHEP_RS11265 | Not Available | Negative | 2638045 - 2639670 | 60185.6 |
| mfs transporter | PHEP_RS11270 | Not Available | Negative | 2639699 - 2641138 | 53485.7 |
| duf4350 domain-containing protein | PHEP_RS11275 | Not Available | Positive | 2641492 - 2642295 | 29831.9 |
| tigr04325 family methyltransferase | PHEP_RS11280 | Not Available | Negative | 2642307 - 2643107 | 30636.1 |
| enoyl-acp reductase fabv | PHEP_RS11285 | Not Available | Negative | 2643160 - 2644353 | 43634.4 |
| isopentenyl-diphosphate delta-isomerase | PHEP_RS11290 | Not Available | Negative | 2644423 - 2644953 | 20507.5 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
