Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | PHEP_RS11040 | Not Available | Negative | 2572144 - 2575497 | 122679.0 |
| sialidase family protein | PHEP_RS11045 | Not Available | Negative | 2575557 - 2576747 | 43479.6 |
| fadr/gntr family transcriptional regulator | PHEP_RS11050 | Not Available | Negative | 2576998 - 2577684 | 26245.4 |
| bifunctional alpha,alpha-trehalose-phosphate synthase (udp-forming)/trehalose-phosphatase | PHEP_RS11055 | Not Available | Positive | 2577852 - 2580029 | 83329.2 |
| glycoside hydrolase family 15 protein | PHEP_RS11060 | Not Available | Negative | 2580026 - 2581810 | 69516.6 |
| serine hydrolase domain-containing protein | PHEP_RS11065 | Not Available | Negative | 2581909 - 2583063 | 42673.5 |
| abc transporter atp-binding protein | PHEP_RS11070 | Not Available | Negative | 2583522 - 2585282 | 65094.3 |
| abc transporter atp-binding protein | PHEP_RS11075 | Not Available | Negative | 2585266 - 2587005 | 63565.3 |
| gfo/idh/moca family protein | PHEP_RS11080 | Not Available | Negative | 2586989 - 2588053 | 39313.3 |
| hypothetical protein | PHEP_RS11085 | Not Available | Positive | 2588244 - 2588825 | 20193.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
