Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-disaccharide hydrolase | PHEP_RS10940 | Not Available | Negative | 2539758 - 2541194 | 51897.8 |
| mfs transporter | PHEP_RS10945 | Not Available | Negative | 2541370 - 2542560 | 42700.3 |
| pqq-dependent sugar dehydrogenase | PHEP_RS10950 | Not Available | Positive | 2542666 - 2545392 | 99734.6 |
| hypothetical protein | PHEP_RS10955 | Not Available | Negative | 2545645 - 2546388 | 27919.4 |
| sialate o-acetylesterase | PHEP_RS10960 | Not Available | Negative | 2546465 - 2547865 | 51333.8 |
| mfs transporter | PHEP_RS10965 | Not Available | Negative | 2547977 - 2549218 | 45187.8 |
| galactose oxidase | PHEP_RS10970 | Not Available | Negative | 2549236 - 2550297 | 37737.5 |
| dihydrodipicolinate synthase family protein | PHEP_RS10975 | Not Available | Negative | 2550290 - 2551216 | 33367.6 |
| sialidase family protein | PHEP_RS10980 | Not Available | Negative | 2551259 - 2552908 | 60839.1 |
| fadr/gntr family transcriptional regulator | PHEP_RS10985 | Not Available | Negative | 2553027 - 2553713 | 26328.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
