Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS10890 | Not Available | Positive | 2527088 - 2528206 | 42380.6 |
| nad-dependent epimerase/dehydratase family protein | PHEP_RS10895 | Not Available | Positive | 2528203 - 2529195 | 36940.6 |
| exodeoxyribonuclease vii small subunit | PHEP_RS10900 | Not Available | Negative | 2529205 - 2529414 | 7719.2 |
| exodeoxyribonuclease vii large subunit | PHEP_RS10905 | Not Available | Negative | 2529389 - 2530789 | 52307.8 |
| s66 peptidase family protein | PHEP_RS10910 | Not Available | Negative | 2530758 - 2531777 | 37477.0 |
| pmoa family protein | PHEP_RS10915 | Not Available | Positive | 2531979 - 2533025 | 39095.3 |
| 3-keto-disaccharide hydrolase | PHEP_RS10920 | Not Available | Positive | 2533061 - 2534422 | 50557.1 |
| gfo/idh/moca family protein | PHEP_RS10925 | Not Available | Positive | 2534436 - 2535794 | 51093.6 |
| sodium/sugar symporter | PHEP_RS10930 | Not Available | Negative | 2535979 - 2537664 | 60893.1 |
| membrane protein | PHEP_RS10935 | Not Available | Negative | 2537771 - 2539741 | 72884.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
