Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase c-terminal domain-containing protein | PHEP_RS10840 | Not Available | Negative | 2510429 - 2511211 | 28737.8 |
| glutathione peroxidase | PHEP_RS10845 | Not Available | Negative | 2511186 - 2511698 | 19326.4 |
| hypothetical protein | PHEP_RS10850 | Not Available | Negative | 2511741 - 2512550 | 29606.9 |
| type i dna topoisomerase | PHEP_RS10855 | Not Available | Positive | 2512997 - 2515570 | 95824.0 |
| hypothetical protein | PHEP_RS10860 | Not Available | Positive | 2515597 - 2516001 | 15065.4 |
| alpha-2-macroglobulin family protein | PHEP_RS10865 | Not Available | Positive | 2516083 - 2521647 | 205286.0 |
| penicillin-binding protein 1c | PHEP_RS10870 | Not Available | Positive | 2521798 - 2524182 | 89013.1 |
| lysoplasmalogenase | PHEP_RS10875 | Not Available | Negative | 2524179 - 2524883 | 26630.9 |
| rna recognition motif domain-containing protein | PHEP_RS10880 | Not Available | Negative | 2525009 - 2525314 | 11113.2 |
| serine palmitoyltransferase | PHEP_RS10885 | Not Available | Positive | 2525805 - 2527010 | 43837.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
