Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | PHEP_RS10740 | Not Available | Positive | 2489368 - 2490516 | 43290.5 |
| fusc family protein | PHEP_RS10745 | Not Available | Positive | 2490723 - 2492882 | 82504.3 |
| organic hydroperoxide resistance protein | PHEP_RS10750 | Not Available | Positive | 2492995 - 2493405 | 14349.8 |
| biotin synthase biob | PHEP_RS10755 | Not Available | Negative | 2493402 - 2494409 | 37099.7 |
| magnesium transporter | PHEP_RS10760 | Not Available | Negative | 2494430 - 2495779 | 49999.3 |
| magnesium/cobalt transporter cora | PHEP_RS10765 | Not Available | Negative | 2495808 - 2496926 | 43445.6 |
| wbqc family protein | PHEP_RS10770 | Not Available | Negative | 2496934 - 2497545 | 24307.7 |
| lysophospholipid acyltransferase family protein | PHEP_RS10775 | Not Available | Positive | 2497623 - 2498465 | 32716.9 |
| glycosyltransferase family 2 protein | PHEP_RS10780 | Not Available | Positive | 2498465 - 2499478 | 38371.9 |
| type ii 3-dehydroquinate dehydratase | PHEP_RS10785 | Not Available | Negative | 2499488 - 2499907 | 15388.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
