Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite exporter taue/safe family protein | PHEP_RS10690 | Not Available | Negative | 2478696 - 2479634 | 33480.7 |
| mate family efflux transporter | PHEP_RS10695 | Not Available | Negative | 2479781 - 2481136 | 49160.7 |
| helix-turn-helix domain-containing protein | PHEP_RS10700 | Not Available | Negative | 2481265 - 2481888 | 23571.4 |
| duf4442 domain-containing protein | PHEP_RS10705 | Not Available | Negative | 2481909 - 2482394 | 18363.5 |
| hypothetical protein | PHEP_RS10710 | Not Available | Positive | 2482475 - 2482780 | 11489.5 |
| hypothetical protein | PHEP_RS10715 | Not Available | Positive | 2482885 - 2483088 | 7063.73 |
| mfs transporter | PHEP_RS10720 | Not Available | Positive | 2483210 - 2484433 | 44498.5 |
| oxygen-dependent coproporphyrinogen oxidase | PHEP_RS10725 | Not Available | Positive | 2484512 - 2485408 | 34356.9 |
| dna gyrase subunit a | PHEP_RS10730 | Not Available | Positive | 2485539 - 2488148 | 97778.6 |
| tetratricopeptide repeat protein | PHEP_RS10735 | Not Available | Positive | 2488208 - 2489284 | 40117.2 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
