Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6528 family protein | PHEP_RS10630 | Not Available | Positive | 2469917 - 2470918 | 36676.1 |
| duf6717 family protein | PHEP_RS10635 | Not Available | Positive | 2471566 - 2471922 | 13660.0 |
| hypothetical protein | PHEP_RS10640 | Not Available | Positive | 2471919 - 2472686 | 28819.3 |
| hypothetical protein | PHEP_RS10645 | Not Available | Positive | 2472785 - 2473243 | 17548.7 |
| hypothetical protein | PHEP_RS10650 | Not Available | Negative | 2473311 - 2473784 | 18327.4 |
| hypothetical protein | PHEP_RS10655 | Not Available | Positive | 2474476 - 2474988 | 19875.5 |
| hypothetical protein | PHEP_RS10660 | Not Available | Positive | 2475270 - 2475746 | 18335.4 |
| jab domain-containing protein | PHEP_RS10675 | Not Available | Positive | 2476754 - 2477212 | 16993.7 |
| duf4833 domain-containing protein | PHEP_RS10680 | Not Available | Positive | 2477898 - 2478473 | 22305.0 |
| hypothetical protein | PHEP_RS10685 | Not Available | Positive | 2478510 - 2478704 | 7323.66 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
