Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | PHEP_RS10535 | Not Available | Positive | 2445903 - 2446277 | 14148.8 |
| duf4256 domain-containing protein | PHEP_RS10540 | Not Available | Positive | 2446287 - 2446853 | 21568.4 |
| sugar mfs transporter | PHEP_RS10545 | Not Available | Positive | 2446940 - 2448346 | 50786.6 |
| winged helix-turn-helix transcriptional regulator | PHEP_RS10550 | Not Available | Negative | 2448343 - 2448732 | 14815.2 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS10555 | Not Available | Positive | 2448823 - 2449569 | 25938.9 |
| phna domain-containing protein | PHEP_RS10560 | Not Available | Positive | 2449618 - 2450193 | 21305.4 |
| d-glycero-alpha-d-manno-heptose-1,7- bisphosphate 7-phosphatase | PHEP_RS10565 | Not Available | Positive | 2450206 - 2450739 | 19934.8 |
| fructose-6-phosphate aldolase | PHEP_RS10570 | Not Available | Negative | 2450810 - 2451469 | 23199.2 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 2451611 - 2451710 | Not Available |
| glutamate synthase large subunit | PHEP_RS10575 | Not Available | Positive | 2452165 - 2456673 | 165364.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
