Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase domain-containing protein | PHEP_RS10485 | Not Available | Positive | 2437574 - 2439367 | 66370.9 |
| sensor histidine kinase | PHEP_RS10490 | Not Available | Negative | 2439439 - 2440641 | 45258.7 |
| atp-binding protein | PHEP_RS10495 | Not Available | Negative | 2440645 - 2441652 | 36918.4 |
| anti-sigma regulatory factor | PHEP_RS10500 | Not Available | Negative | 2441645 - 2442058 | 14847.5 |
| stas domain-containing protein | PHEP_RS10505 | Not Available | Negative | 2442039 - 2442419 | 13696.7 |
| stas domain-containing protein | PHEP_RS10510 | Not Available | Negative | 2442455 - 2443312 | 31579.4 |
| response regulator | PHEP_RS10515 | Not Available | Positive | 2443623 - 2443985 | 13394.2 |
| alpha/beta fold hydrolase | PHEP_RS10520 | Not Available | Negative | 2443995 - 2444849 | 31673.5 |
| arsr/smtb family transcription factor | PHEP_RS10525 | Not Available | Positive | 2445099 - 2445422 | 12524.2 |
| srpbcc family protein | PHEP_RS10530 | Not Available | Positive | 2445429 - 2445896 | 18004.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
