Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS10435 | Not Available | Positive | 2424604 - 2424915 | 11137.5 |
| tail fiber domain-containing protein | PHEP_RS10440 | Not Available | Positive | 2424995 - 2425429 | 16070.5 |
| alpha-glucan family phosphorylase | PHEP_RS10445 | Not Available | Negative | 2425499 - 2427151 | 62293.6 |
| selt/selw/selh family protein | PHEP_RS10450 | Not Available | Positive | 2427276 - 2427557 | 10484.8 |
| duf6266 family protein | PHEP_RS10455 | Not Available | Positive | 2427833 - 2428462 | 22936.3 |
| Trna-lys | Not Available | Not Available | Positive | 2428604 - 2428676 | Not Available |
| tetratricopeptide repeat protein | PHEP_RS10465 | Not Available | Negative | 2428863 - 2432774 | 143854.0 |
| hypothetical protein | PHEP_RS10470 | Not Available | Negative | 2432783 - 2434159 | 50579.9 |
| hypothetical protein | PHEP_RS10475 | Not Available | Negative | 2434162 - 2435271 | 39056.1 |
| tetratricopeptide repeat-containing sensor histidine kinase | PHEP_RS10480 | Not Available | Positive | 2435436 - 2437373 | 72541.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
