Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | PHEP_RS10385 | Not Available | Negative | 2414208 - 2414867 | 25444.6 |
| Trna-lys | Not Available | Not Available | Positive | 2415094 - 2415166 | Not Available |
| nicotinate phosphoribosyltransferase | PHEP_RS10395 | Not Available | Negative | 2415241 - 2416401 | 44129.3 |
| deor/glpr family dna-binding transcription regulator | PHEP_RS10400 | Not Available | Negative | 2416422 - 2417171 | 27514.7 |
| abc-f family atp-binding cassette domain-containing protein | PHEP_RS10405 | Not Available | Negative | 2417202 - 2418794 | 59493.9 |
| serine hydrolase domain-containing protein | PHEP_RS10410 | Not Available | Positive | 2419038 - 2420366 | 49054.0 |
| spha family protein | PHEP_RS10415 | Not Available | Positive | 2420402 - 2421361 | 34942.5 |
| nad-dependent succinate-semialdehyde dehydrogenase | PHEP_RS10420 | Not Available | Negative | 2421367 - 2422740 | 50006.1 |
| srpbcc family protein | PHEP_RS10425 | Not Available | Negative | 2422795 - 2423334 | 20563.2 |
| lcp family protein | PHEP_RS10430 | Not Available | Positive | 2423512 - 2424495 | 35793.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
