Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuosine precursor transporter | PHEP_RS10280 | Not Available | Positive | 2391861 - 2392631 | 28511.8 |
| grea/greb family elongation factor | PHEP_RS10285 | Not Available | Negative | 2392642 - 2393019 | 14132.1 |
| histone h1 | PHEP_RS10290 | Not Available | Positive | 2393516 - 2393695 | 6572.87 |
| l-glyceraldehyde 3-phosphate reductase | PHEP_RS10295 | Not Available | Positive | 2393759 - 2394760 | 36989.2 |
| yceh family protein | PHEP_RS10300 | Not Available | Positive | 2394799 - 2395446 | 24222.4 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS10310 | Not Available | Positive | 2395820 - 2398906 | 113314.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS10315 | Not Available | Positive | 2398918 - 2400291 | 51632.3 |
| doxx family protein | PHEP_RS10320 | Not Available | Positive | 2400307 - 2401641 | 51842.0 |
| hypothetical protein | PHEP_RS10325 | Not Available | Positive | 2401645 - 2403075 | 55221.2 |
| hypothetical protein | PHEP_RS10330 | Not Available | Positive | 2403083 - 2404564 | 58113.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
