Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kpsf/gutq family sugar-phosphate isomerase | PHEP_RS10230 | Not Available | Negative | 2379940 - 2380905 | 34562.3 |
| dna helicase recq | PHEP_RS10235 | Not Available | Positive | 2380995 - 2383184 | 82262.0 |
| 3-deoxy-8-phosphooctulonate synthase | PHEP_RS10240 | Not Available | Positive | 2383201 - 2384016 | 29151.5 |
| ompa family protein | PHEP_RS10245 | Not Available | Negative | 2384044 - 2385939 | 71317.1 |
| 7-carboxy-7-deazaguanine synthase quee | PHEP_RS10250 | Not Available | Negative | 2385996 - 2386619 | 23466.1 |
| rieske (2fe-2s) protein | PHEP_RS10255 | Not Available | Positive | 2386696 - 2387037 | 13075.6 |
| bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase | PHEP_RS10260 | Not Available | Negative | 2387042 - 2387923 | 31713.7 |
| translation elongation factor 4 | PHEP_RS10265 | Not Available | Negative | 2387964 - 2389751 | 66795.0 |
| nitrilase family protein | PHEP_RS10270 | Not Available | Negative | 2389819 - 2390622 | 31066.3 |
| methionine aminotransferase | PHEP_RS10275 | Not Available | Negative | 2390647 - 2391792 | 42942.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
