Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | PHEP_RS10030 | Not Available | Negative | 2329865 - 2331682 | 68045.7 |
| hypothetical protein | PHEP_RS22350 | Not Available | Positive | 2331825 - 2331968 | 5552.78 |
| glycosyltransferase family 2 protein | PHEP_RS10040 | Not Available | Negative | 2332965 - 2333888 | 35324.5 |
| glycosyltransferase family 2 protein | PHEP_RS10045 | Not Available | Positive | 2334141 - 2335046 | 35125.3 |
| abc transporter atp-binding protein | PHEP_RS10050 | Not Available | Negative | 2335069 - 2336331 | 47154.9 |
| abc transporter permease | PHEP_RS10055 | Not Available | Negative | 2336342 - 2337208 | 33586.9 |
| polysaccharide deacetylase family protein | PHEP_RS10060 | Not Available | Negative | 2337242 - 2338198 | 36569.6 |
| methyltransferase domain-containing protein | PHEP_RS10065 | Not Available | Negative | 2338198 - 2338935 | 27625.0 |
| glycosyltransferase family 2 protein | PHEP_RS10070 | Not Available | Positive | 2339167 - 2340078 | 34516.6 |
| glycosyltransferase family 2 protein | PHEP_RS10075 | Not Available | Positive | 2340082 - 2341263 | 44819.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
