Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS09980 | Not Available | Positive | 2319760 - 2320080 | 12138.0 |
| duf6266 family protein | PHEP_RS21625 | Not Available | Positive | 2320172 - 2320813 | 23099.6 |
| hypothetical protein | PHEP_RS09990 | Not Available | Positive | 2320873 - 2321535 | 25905.0 |
| duf6266 family protein | PHEP_RS09995 | Not Available | Positive | 2321522 - 2322163 | 23522.6 |
| degt/dnrj/eryc1/strs family aminotransferase | PHEP_RS10000 | Not Available | Negative | 2322170 - 2323267 | 41544.9 |
| glycosyltransferase family 2 protein | PHEP_RS10005 | Not Available | Negative | 2323301 - 2324275 | 37790.5 |
| cytochrome p450 | PHEP_RS10010 | Not Available | Negative | 2324417 - 2326633 | 84990.8 |
| ubia family prenyltransferase | PHEP_RS10015 | Not Available | Negative | 2326649 - 2327659 | 38598.5 |
| hypothetical protein | PHEP_RS10020 | Not Available | Negative | 2327646 - 2328695 | 40169.9 |
| glycosyltransferase family 4 protein | PHEP_RS10025 | Not Available | Negative | 2328702 - 2329868 | 43722.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
