Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | PHEP_RS00055 | Not Available | Negative | 13888 - 14397 | 18397.3 |
| l-aspartate oxidase | PHEP_RS00060 | Not Available | Negative | 14401 - 15987 | 59319.0 |
| quinolinate synthase nada | PHEP_RS00065 | Not Available | Positive | 16501 - 17499 | 37209.1 |
| thiamine-phosphate kinase | PHEP_RS00070 | Not Available | Positive | 17584 - 18624 | 38181.8 |
| dna recombination protein rmuc | PHEP_RS00075 | Not Available | Negative | 18619 - 19941 | 50263.5 |
| zinc metallopeptidase | PHEP_RS00080 | Not Available | Positive | 20158 - 20850 | 25803.6 |
| co2+/mg2+ efflux protein apag | PHEP_RS00085 | Not Available | Negative | 20855 - 21241 | 14560.2 |
| trna dihydrouridine synthase dusb | PHEP_RS00090 | Not Available | Negative | 21275 - 22282 | 38116.1 |
| cpbp family intramembrane glutamic endopeptidase | PHEP_RS00095 | Not Available | Positive | 22346 - 23254 | 34213.7 |
| phosphatidate cytidylyltransferase | PHEP_RS00100 | Not Available | Positive | 23251 - 24060 | 30307.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
