Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc oxidoreductase | PHEP_RS09835 | Not Available | Positive | 2281783 - 2283225 | 54092.6 |
| hypothetical protein | PHEP_RS09840 | Not Available | Positive | 2283227 - 2283667 | 17103.8 |
| duf707 domain-containing protein | PHEP_RS09845 | Not Available | Positive | 2283709 - 2284557 | 32930.7 |
| acyltransferase family protein | PHEP_RS09850 | Not Available | Negative | 2284619 - 2285677 | 39540.6 |
| rna polymerase sigma-70 factor | PHEP_RS09855 | Not Available | Positive | 2286127 - 2286696 | 21947.3 |
| fecr family protein | PHEP_RS09860 | Not Available | Positive | 2286791 - 2287999 | 44047.9 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS09865 | Not Available | Positive | 2288134 - 2291439 | 121784.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS09870 | Not Available | Positive | 2291451 - 2292830 | 51501.2 |
| tlpa family protein disulfide reductase | PHEP_RS09875 | Not Available | Positive | 2292873 - 2294438 | 60289.6 |
| rna polymerase sigma factor | PHEP_RS09880 | Not Available | Positive | 2295082 - 2295651 | 22283.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
