Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc oxidoreductase | PHEP_RS09785 | Not Available | Positive | 2269971 - 2271647 | 62976.5 |
| mop flippase family protein | PHEP_RS09790 | Not Available | Negative | 2271656 - 2273089 | 52994.7 |
| glycosyltransferase family 2 protein | PHEP_RS09795 | Not Available | Negative | 2273124 - 2273927 | 31783.9 |
| hypothetical protein | PHEP_RS09800 | Not Available | Negative | 2274059 - 2275438 | 50318.3 |
| alpha-1,2-fucosyltransferase | PHEP_RS09805 | Not Available | Positive | 2275655 - 2276467 | 32154.6 |
| hypothetical protein | PHEP_RS09810 | Not Available | Positive | 2276476 - 2277459 | 38714.5 |
| beta-1,6-n-acetylglucosaminyltransferase | PHEP_RS09815 | Not Available | Negative | 2277456 - 2278316 | 33624.6 |
| glycosyltransferase family 39 protein | PHEP_RS09820 | Not Available | Negative | 2278350 - 2279978 | 63459.8 |
| had family hydrolase | PHEP_RS09825 | Not Available | Positive | 2280054 - 2280728 | 25935.8 |
| ubia prenyltransferase family protein | PHEP_RS09830 | Not Available | Positive | 2280728 - 2281762 | 39696.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
