Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | PHEP_RS09735 | Not Available | Negative | 2258074 - 2259267 | 45902.8 |
| tolc family protein | PHEP_RS09740 | Not Available | Positive | 2259955 - 2260644 | 26241.6 |
| exopolysaccharide transport family protein | PHEP_RS09745 | Not Available | Positive | 2260665 - 2262812 | 80544.8 |
| o-antigen ligase family protein | PHEP_RS09750 | Not Available | Positive | 2262866 - 2264311 | 53967.8 |
| acyltransferase | PHEP_RS09755 | Not Available | Positive | 2264429 - 2265073 | 23473.0 |
| glycosyltransferase family 2 protein | PHEP_RS09760 | Not Available | Positive | 2265083 - 2265856 | 30587.2 |
| glycosyltransferase | PHEP_RS09765 | Not Available | Positive | 2265893 - 2267113 | 46767.4 |
| glycosyltransferase family 2 protein | PHEP_RS09770 | Not Available | Positive | 2267221 - 2268318 | 41597.8 |
| glycosyltransferase family 2 protein | PHEP_RS09775 | Not Available | Negative | 2268350 - 2269210 | 33253.3 |
| gluconate 2-dehydrogenase subunit 3 family protein | PHEP_RS21615 | Not Available | Positive | 2269378 - 2269953 | 21318.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
