Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | PHEP_RS09685 | Not Available | Negative | 2247191 - 2248039 | 31232.6 |
| cold-shock protein | PHEP_RS09690 | Not Available | Negative | 2248126 - 2248335 | 7569.86 |
| hypothetical protein | PHEP_RS09695 | Not Available | Positive | 2248501 - 2248719 | 8013.89 |
| ymgg-like glycine zipper-containing protein | PHEP_RS09700 | Not Available | Positive | 2248770 - 2249237 | 16272.8 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | PHEP_RS09705 | Not Available | Negative | 2249297 - 2252836 | 133575.0 |
| hypothetical protein | PHEP_RS09710 | Not Available | Positive | 2253334 - 2253705 | 13799.6 |
| response regulator | PHEP_RS09715 | Not Available | Positive | 2253943 - 2254326 | 14303.5 |
| sugar transferase | PHEP_RS09720 | Not Available | Positive | 2254323 - 2255408 | 41946.3 |
| beta-galactosidase | PHEP_RS09725 | Not Available | Positive | 2255493 - 2257070 | 58620.5 |
| hypothetical protein | PHEP_RS09730 | Not Available | Positive | 2257104 - 2258054 | 37629.6 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
