Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | PHEP_RS09635 | Not Available | Positive | 2237626 - 2238192 | 21392.8 |
| had family hydrolase | PHEP_RS09640 | Not Available | Positive | 2238289 - 2238984 | 26867.4 |
| phosphoribosyltransferase family protein | PHEP_RS09645 | Not Available | Positive | 2238981 - 2239817 | 32830.1 |
| terd family protein | PHEP_RS09650 | Not Available | Positive | 2239820 - 2240374 | 20587.0 |
| terd family protein | PHEP_RS09655 | Not Available | Positive | 2240381 - 2240995 | 22254.3 |
| toxic anion resistance protein | PHEP_RS09660 | Not Available | Positive | 2241021 - 2242118 | 41121.1 |
| hypothetical protein | PHEP_RS09665 | Not Available | Positive | 2242127 - 2243089 | 37868.5 |
| terc/alx family metal homeostasis membrane protein | PHEP_RS09670 | Not Available | Positive | 2243143 - 2244132 | 36530.7 |
| ompa family protein | PHEP_RS09675 | Not Available | Negative | 2244198 - 2245535 | 48174.7 |
| mbl fold metallo-hydrolase | PHEP_RS09680 | Not Available | Negative | 2245756 - 2247141 | 51595.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
