Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PHEP_RS09585 | Not Available | Positive | 2228123 - 2229292 | 44169.9 |
| abc transporter permease | PHEP_RS09590 | Not Available | Positive | 2229276 - 2230448 | 44137.7 |
| duf72 domain-containing protein | PHEP_RS09595 | Not Available | Positive | 2230552 - 2231322 | 29696.1 |
| hypothetical protein | PHEP_RS22215 | Not Available | Positive | 2231375 - 2231530 | 6134.17 |
| stn and carboxypeptidase regulatory-like domain-containing protein | PHEP_RS09605 | Not Available | Negative | 2231564 - 2233351 | 64679.7 |
| fecr family protein | PHEP_RS09610 | Not Available | Negative | 2233348 - 2234310 | 36334.7 |
| rna polymerase sigma-70 factor | PHEP_RS09615 | Not Available | Negative | 2234318 - 2234905 | 22996.8 |
| duf4833 domain-containing protein | PHEP_RS09620 | Not Available | Negative | 2234935 - 2235633 | 27086.2 |
| head gin domain-containing protein | PHEP_RS09625 | Not Available | Negative | 2235644 - 2236294 | 22950.2 |
| hypothetical protein | PHEP_RS09630 | Not Available | Negative | 2236334 - 2237494 | 40873.9 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
