Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyphosphate kinase 2 family protein | PHEP_RS09535 | Not Available | Positive | 2215931 - 2216812 | 34135.7 |
| serine hydrolase | PHEP_RS09540 | Not Available | Negative | 2216824 - 2218035 | 46350.4 |
| tonb-dependent receptor | PHEP_RS09545 | Not Available | Positive | 2218415 - 2220478 | 79010.1 |
| ynce family protein | PHEP_RS09550 | Not Available | Positive | 2220480 - 2221604 | 41579.1 |
| hypothetical protein | PHEP_RS09555 | Not Available | Positive | 2221623 - 2222606 | 36333.6 |
| ynce family protein | PHEP_RS09560 | Not Available | Positive | 2222609 - 2223733 | 40359.1 |
| hypothetical protein | PHEP_RS09565 | Not Available | Positive | 2223755 - 2224852 | 39225.2 |
| duf6580 family putative transport protein | PHEP_RS09570 | Not Available | Positive | 2224924 - 2225493 | 20741.8 |
| tolc family protein | PHEP_RS09575 | Not Available | Positive | 2225617 - 2227101 | 55501.7 |
| hlyd family secretion protein | PHEP_RS09580 | Not Available | Positive | 2227137 - 2228123 | 36376.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
