Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqge/algh family protein | PHEP_RS09435 | Not Available | Positive | 2190608 - 2191114 | 19153.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | PHEP_RS09440 | Not Available | Negative | 2191124 - 2191621 | 17396.2 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | PHEP_RS09445 | Not Available | Negative | 2191622 - 2192761 | 42672.5 |
| nad(p)/fad-dependent oxidoreductase | PHEP_RS09450 | Not Available | Positive | 2192779 - 2194008 | 44936.3 |
| serpin family protein | PHEP_RS09455 | Not Available | Positive | 2194384 - 2195625 | 45681.0 |
| amidohydrolase family protein | PHEP_RS09460 | Not Available | Negative | 2195639 - 2198893 | 120569.0 |
| recq family atp-dependent dna helicase | PHEP_RS09465 | Not Available | Positive | 2198969 - 2200861 | 71633.7 |
| head gin domain-containing protein | PHEP_RS09470 | Not Available | Positive | 2200864 - 2201577 | 25606.9 |
| mfs transporter | PHEP_RS09475 | Not Available | Positive | 2201622 - 2202914 | 48095.7 |
| (fe-s)-binding protein | PHEP_RS09480 | Not Available | Positive | 2202911 - 2203648 | 27471.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
