Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | PHEP_RS00905 | Not Available | Negative | 210854 - 211534 | 23203.9 |
| abc transporter atp-binding protein | PHEP_RS00910 | Not Available | Negative | 211700 - 212398 | 26190.5 |
| duf5687 family protein | PHEP_RS00915 | Not Available | Negative | 212406 - 213878 | 56488.9 |
| replication-associated recombination protein a | PHEP_RS00920 | Not Available | Negative | 213880 - 215160 | 47132.0 |
| dead/deah box helicase | PHEP_RS00925 | Not Available | Negative | 215212 - 216468 | 46563.9 |
| duf4197 domain-containing protein | PHEP_RS00930 | Not Available | Negative | 216519 - 217277 | 27037.1 |
| vwa domain-containing protein | PHEP_RS00935 | Not Available | Negative | 217283 - 219151 | 67656.2 |
| rna polymerase sigma factor | PHEP_RS00940 | Not Available | Positive | 219280 - 219858 | 22541.3 |
| energy transducer tonb | PHEP_RS00945 | Not Available | Positive | 219851 - 221164 | 47351.1 |
| inorganic phosphate transporter | PHEP_RS00950 | Not Available | Negative | 221161 - 222171 | 35555.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
