Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease z | PHEP_RS09290 | Not Available | Positive | 2156009 - 2156920 | 34359.2 |
| mlad family protein | PHEP_RS09295 | Not Available | Negative | 2156917 - 2157867 | 34094.2 |
| n-acetylmuramoyl-l-alanine amidase family protein | PHEP_RS09300 | Not Available | Negative | 2157932 - 2158777 | 31555.8 |
| n-acetylmuramoyl-l-alanine amidase family protein | PHEP_RS09305 | Not Available | Negative | 2158807 - 2159685 | 32850.5 |
| putative lps assembly protein lptd | PHEP_RS09310 | Not Available | Positive | 2159775 - 2162423 | 98862.1 |
| competence/damage-inducible protein a | PHEP_RS09315 | Not Available | Positive | 2162438 - 2163685 | 45410.2 |
| dihydrolipoamide acetyltransferase family protein | PHEP_RS09320 | Not Available | Positive | 2163736 - 2165058 | 47902.8 |
| homoserine dehydrogenase | PHEP_RS09325 | Not Available | Negative | 2165129 - 2166370 | 46623.6 |
| homoserine o-acetyltransferase family protein | PHEP_RS09330 | Not Available | Negative | 2166379 - 2167437 | 39144.6 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | PHEP_RS09335 | Not Available | Negative | 2167471 - 2168775 | 46870.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
