Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | PHEP_RS09145 | Not Available | Negative | 2127602 - 2127973 | 13843.2 |
| group iii truncated hemoglobin | PHEP_RS09150 | Not Available | Positive | 2128158 - 2128547 | 14902.1 |
| putative ig domain-containing protein | PHEP_RS09155 | Not Available | Negative | 2128556 - 2130163 | 60087.6 |
| hypothetical protein | PHEP_RS09160 | Not Available | Negative | 2130175 - 2131791 | 58066.9 |
| lytr/algr family response regulator transcription factor | PHEP_RS09165 | Not Available | Negative | 2131942 - 2132679 | 28117.7 |
| sensor histidine kinase | PHEP_RS09170 | Not Available | Negative | 2132683 - 2133711 | 39655.3 |
| nad(p)h-binding protein | PHEP_RS09175 | Not Available | Positive | 2133977 - 2134351 | 13126.5 |
| Trna-ser | Not Available | Not Available | Positive | 2134535 - 2134619 | Not Available |
| yihy/virulence factor brkb family protein | PHEP_RS09185 | Not Available | Negative | 2134714 - 2135706 | 37904.4 |
| endolytic transglycosylase mltg | PHEP_RS09190 | Not Available | Negative | 2135726 - 2136772 | 40090.4 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
