Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maue/doxx family redox-associated membrane protein | PHEP_RS09095 | Not Available | Positive | 2120578 - 2121057 | 18519.2 |
| hypothetical protein | PHEP_RS09100 | Not Available | Positive | 2121204 - 2121464 | 9007.82 |
| hypothetical protein | PHEP_RS09105 | Not Available | Positive | 2121534 - 2122580 | 39662.4 |
| crp/fnr family transcriptional regulator | PHEP_RS09110 | Not Available | Positive | 2122635 - 2123246 | 23744.5 |
| rpn family recombination-promoting nuclease/putative transposase | PHEP_RS09115 | Not Available | Negative | 2123251 - 2124123 | 33975.4 |
| hypothetical protein | PHEP_RS09120 | Not Available | Positive | 2124429 - 2124779 | 13382.5 |
| duf6266 family protein | PHEP_RS09125 | Not Available | Positive | 2124860 - 2125504 | 22926.6 |
| peptidoglycan-binding protein | PHEP_RS09130 | Not Available | Positive | 2125591 - 2126085 | 18484.2 |
| duf6266 family protein | PHEP_RS09135 | Not Available | Positive | 2126091 - 2126726 | 23026.9 |
| grea/greb family elongation factor | PHEP_RS09140 | Not Available | Positive | 2127156 - 2127533 | 14239.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
