Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | PHEP_RS00855 | Not Available | Positive | 199855 - 200850 | 37077.3 |
| pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase | PHEP_RS00860 | Not Available | Positive | 200882 - 202537 | 57724.2 |
| histidine--trna ligase | PHEP_RS00865 | Not Available | Positive | 202624 - 204012 | 51289.0 |
| response regulator transcription factor | PHEP_RS00870 | Not Available | Negative | 204028 - 204420 | 14739.1 |
| hypothetical protein | PHEP_RS00875 | Not Available | Positive | 204635 - 204973 | 12911.7 |
| tonb-dependent receptor | PHEP_RS00880 | Not Available | Positive | 205136 - 207427 | 83637.5 |
| alpha/beta fold hydrolase | PHEP_RS00885 | Not Available | Positive | 207563 - 208552 | 37179.4 |
| zinc-dependent peptidase | PHEP_RS00890 | Not Available | Negative | 208553 - 209335 | 29564.7 |
| gfo/idh/moca family oxidoreductase | PHEP_RS00895 | Not Available | Negative | 209338 - 210351 | 37827.2 |
| hypothetical protein | PHEP_RS00900 | Not Available | Positive | 210431 - 210772 | 13220.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
