Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS08890 | Not Available | Positive | 2079445 - 2080212 | 29358.1 |
| alpha/beta hydrolase | PHEP_RS08895 | Not Available | Positive | 2080275 - 2081177 | 33296.2 |
| voc family protein | PHEP_RS08900 | Not Available | Positive | 2081255 - 2081647 | 15108.3 |
| alpha/beta fold hydrolase | PHEP_RS08905 | Not Available | Positive | 2081666 - 2082538 | 31736.1 |
| iron chaperone | PHEP_RS08910 | Not Available | Positive | 2082559 - 2082948 | 14506.4 |
| hypothetical protein | PHEP_RS08915 | Not Available | Positive | 2083089 - 2083430 | 12877.2 |
| gnat family n-acetyltransferase | PHEP_RS08920 | Not Available | Positive | 2083481 - 2084059 | 22579.6 |
| duf4209 domain-containing protein | PHEP_RS08925 | Not Available | Positive | 2084068 - 2085732 | 63254.1 |
| hypothetical protein | PHEP_RS08930 | Not Available | Positive | 2085772 - 2087511 | 67945.3 |
| hypothetical protein | PHEP_RS08935 | Not Available | Negative | 2087549 - 2087959 | 15766.1 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
