Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | PHEP_RS08840 | Not Available | Positive | 2073640 - 2074098 | 17226.6 |
| phytanoyl-coa dioxygenase family protein | PHEP_RS08845 | Not Available | Positive | 2074109 - 2074936 | 31539.5 |
| duf4199 domain-containing protein | PHEP_RS08850 | Not Available | Positive | 2075023 - 2075517 | 18369.0 |
| glxa family transcriptional regulator | PHEP_RS08855 | Not Available | Positive | 2075531 - 2076508 | 37148.2 |
| crp/fnr family transcriptional regulator | PHEP_RS08860 | Not Available | Positive | 2076514 - 2077092 | 22288.9 |
| voc family protein | PHEP_RS08865 | Not Available | Positive | 2077176 - 2077583 | 15499.4 |
| duf4199 domain-containing protein | PHEP_RS08870 | Not Available | Positive | 2077603 - 2078091 | 18535.2 |
| duf1801 domain-containing protein | PHEP_RS08875 | Not Available | Positive | 2078088 - 2078447 | 13514.6 |
| srpbcc family protein | PHEP_RS08880 | Not Available | Positive | 2078543 - 2078977 | 16244.2 |
| rida family protein | PHEP_RS08885 | Not Available | Positive | 2079018 - 2079443 | 16125.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
