Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS22200 | Not Available | Positive | 2067701 - 2067865 | 6416.47 |
| Trna-met | Not Available | Not Available | Positive | 2068147 - 2068220 | Not Available |
| tyrosine-type recombinase/integrase | PHEP_RS08805 | Not Available | Positive | 2068404 - 2069705 | 50112.3 |
| hypothetical protein | PHEP_RS22205 | Not Available | Positive | 2069780 - 2069926 | 5380.94 |
| dinb family protein | PHEP_RS08810 | Not Available | Positive | 2070202 - 2070711 | 19577.2 |
| hypothetical protein | PHEP_RS21585 | Not Available | Negative | 2070833 - 2071207 | 13848.7 |
| voc family protein | PHEP_RS08820 | Not Available | Negative | 2071288 - 2071683 | 14401.1 |
| glxa family transcriptional regulator | PHEP_RS08825 | Not Available | Negative | 2071768 - 2072736 | 37309.2 |
| voc family protein | PHEP_RS08830 | Not Available | Positive | 2072845 - 2073267 | 16141.4 |
| hypothetical protein | PHEP_RS08835 | Not Available | Positive | 2073293 - 2073628 | 12884.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
