Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS08755 | Not Available | Negative | 2061925 - 2062209 | 10815.0 |
| hypothetical protein | PHEP_RS22330 | Not Available | Negative | 2062287 - 2062517 | 8902.13 |
| hypothetical protein | PHEP_RS22335 | Not Available | Negative | 2062574 - 2062732 | 6101.33 |
| hypothetical protein | PHEP_RS08765 | Not Available | Positive | 2063079 - 2063456 | 12444.8 |
| nucleotidyl transferase abieii/abigii toxin family protein | PHEP_RS08770 | Not Available | Positive | 2063457 - 2063708 | 10226.5 |
| hypothetical protein | PHEP_RS22195 | Not Available | Negative | 2063755 - 2063907 | 5736.16 |
| rpn family recombination-promoting nuclease/putative transposase | PHEP_RS08775 | Not Available | Negative | 2064544 - 2065446 | 34870.4 |
| hypothetical protein | PHEP_RS08780 | Not Available | Negative | 2065671 - 2066063 | 15222.2 |
| hypothetical protein | PHEP_RS08785 | Not Available | Positive | 2066152 - 2066394 | 9198.07 |
| rpn family recombination-promoting nuclease/putative transposase | PHEP_RS08790 | Not Available | Negative | 2066483 - 2067292 | 31567.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
