Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpn family recombination-promoting nuclease/putative transposase | PHEP_RS21905 | Not Available | Negative | 2055112 - 2055945 | 32392.6 |
| hypothetical protein | PHEP_RS08720 | Not Available | Negative | 2056047 - 2056247 | 7470.16 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS08725 | Not Available | Positive | 2056381 - 2057400 | 36804.8 |
| sdr family nad(p)-dependent oxidoreductase | PHEP_RS08730 | Not Available | Positive | 2057404 - 2057613 | 7659.46 |
| helix-turn-helix domain-containing protein | PHEP_RS08735 | Not Available | Positive | 2057589 - 2058401 | 31729.5 |
| duf6934 family protein | PHEP_RS22185 | Not Available | Negative | 2058505 - 2058681 | 7019.26 |
| rpn family recombination-promoting nuclease/putative transposase | PHEP_RS08740 | Not Available | Negative | 2058749 - 2059600 | 32850.1 |
| hypothetical protein | PHEP_RS08745 | Not Available | Positive | 2059947 - 2060324 | 12359.7 |
| hypothetical protein | PHEP_RS08750 | Not Available | Positive | 2060449 - 2061162 | 27051.2 |
| hypothetical protein | PHEP_RS22190 | Not Available | Negative | 2061611 - 2061763 | 5737.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
