Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein | PHEP_RS08670 | Not Available | Negative | 2048237 - 2048428 | 6897.2 |
| hypothetical protein | PHEP_RS08675 | Not Available | Positive | 2048677 - 2048904 | 7955.62 |
| hypothetical protein | PHEP_RS08680 | Not Available | Positive | 2048989 - 2049231 | 9043.27 |
| cora family divalent cation transporter | PHEP_RS08685 | Not Available | Positive | 2049261 - 2050157 | 34651.5 |
| rpn family recombination-promoting nuclease/putative transposase | PHEP_RS08690 | Not Available | Negative | 2050539 - 2051495 | 37000.1 |
| duf1016 n-terminal domain-containing protein | PHEP_RS08695 | Not Available | Negative | 2051693 - 2051953 | 10254.5 |
| fpg/nei family dna glycosylase | PHEP_RS08700 | Not Available | Positive | 2052072 - 2052848 | 29017.6 |
| transporter | PHEP_RS08705 | Not Available | Positive | 2052898 - 2053746 | 31929.1 |
| hypothetical protein | PHEP_RS22325 | Not Available | Negative | 2053921 - 2054079 | 6081.34 |
| hypothetical protein | PHEP_RS08710 | Not Available | Negative | 2054630 - 2054824 | 6757.33 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
