Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 130 protein | PHEP_RS08620 | Not Available | Positive | 2041117 - 2042184 | 39464.3 |
| cina family protein | PHEP_RS08625 | Not Available | Negative | 2042248 - 2042751 | 18412.5 |
| duf6766 family protein | PHEP_RS08630 | Not Available | Negative | 2042779 - 2043450 | 25284.1 |
| sdr family oxidoreductase | PHEP_RS08635 | Not Available | Negative | 2043453 - 2044211 | 27952.9 |
| hypothetical protein | PHEP_RS08640 | Not Available | Negative | 2044367 - 2044687 | 11860.4 |
| ferritin-like domain-containing protein | PHEP_RS08645 | Not Available | Negative | 2044807 - 2045361 | 20268.9 |
| duf4142 domain-containing protein | PHEP_RS08650 | Not Available | Positive | 2045642 - 2046250 | 21731.1 |
| mechanosensitive ion channel family protein | PHEP_RS08655 | Not Available | Positive | 2046277 - 2047077 | 29770.2 |
| hypothetical protein | PHEP_RS08660 | Not Available | Positive | 2047084 - 2047278 | 7324.87 |
| inorganic diphosphatase | PHEP_RS21575 | Not Available | Positive | 2047306 - 2048106 | 30039.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
