Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4142 domain-containing protein | PHEP_RS08575 | Not Available | Negative | 2034357 - 2034941 | 21323.9 |
| sensor histidine kinase | PHEP_RS08580 | Not Available | Positive | 2035074 - 2037074 | 75210.3 |
| hypothetical protein | PHEP_RS08585 | Not Available | Positive | 2037108 - 2037287 | 6404.78 |
| pas domain-containing protein | PHEP_RS08590 | Not Available | Negative | 2037365 - 2038348 | 38058.3 |
| srpbcc family protein | PHEP_RS08595 | Not Available | Positive | 2038502 - 2038942 | 17139.8 |
| arsr/smtb family transcription factor | PHEP_RS08600 | Not Available | Positive | 2038929 - 2039261 | 12684.2 |
| hypothetical protein | PHEP_RS22180 | Not Available | Negative | 2039351 - 2039524 | 6526.03 |
| duf3606 domain-containing protein | PHEP_RS08605 | Not Available | Positive | 2039861 - 2040052 | 6890.2 |
| hypothetical protein | PHEP_RS08610 | Not Available | Positive | 2040064 - 2040375 | 11113.3 |
| hypothetical protein | PHEP_RS08615 | Not Available | Positive | 2040563 - 2040790 | 8877.22 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
