Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS00805 | Not Available | Positive | 190939 - 191433 | 18890.7 |
| s1/p1 nuclease | PHEP_RS00810 | Not Available | Positive | 191456 - 192262 | 30548.6 |
| low molecular weight protein-tyrosine-phosphatase | PHEP_RS00815 | Not Available | Positive | 192265 - 192702 | 16882.3 |
| duf1543 domain-containing protein | PHEP_RS00820 | Not Available | Positive | 192725 - 193282 | 20645.9 |
| tetratricopeptide repeat protein | PHEP_RS00825 | Not Available | Positive | 193342 - 194016 | 25035.9 |
| carboxy terminal-processing peptidase | PHEP_RS00830 | Not Available | Positive | 194178 - 196358 | 81135.9 |
| spfh domain-containing protein | PHEP_RS00835 | Not Available | Negative | 196435 - 197373 | 34879.2 |
| hypothetical protein | PHEP_RS00840 | Not Available | Positive | 197512 - 197697 | 6593.31 |
| capa family protein | PHEP_RS00845 | Not Available | Negative | 197694 - 198803 | 39915.0 |
| c40 family peptidase | PHEP_RS00850 | Not Available | Negative | 198909 - 199463 | 20859.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
