Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss type a sorting domain-containing protein | PHEP_RS08425 | Not Available | Negative | 1990965 - 1991462 | 17705.4 |
| arac family transcriptional regulator | PHEP_RS08430 | Not Available | Negative | 1991535 - 1992365 | 32084.0 |
| alpha/beta hydrolase | PHEP_RS08435 | Not Available | Negative | 1992483 - 1993121 | 23101.9 |
| ring-cleaving dioxygenase | PHEP_RS08440 | Not Available | Negative | 1993123 - 1994058 | 35082.5 |
| bama/tama family outer membrane protein | PHEP_RS08445 | Not Available | Positive | 1994161 - 1996695 | 96701.5 |
| sterol desaturase family protein | PHEP_RS08450 | Not Available | Positive | 1996789 - 1997403 | 24231.7 |
| nramp family divalent metal transporter | PHEP_RS08455 | Not Available | Positive | 1997585 - 1998778 | 42111.3 |
| nad-dependent epimerase/dehydratase family protein | PHEP_RS08460 | Not Available | Positive | 1998795 - 1999811 | 37055.6 |
| dihydrodipicolinate synthase family protein | PHEP_RS08465 | Not Available | Positive | 1999811 - 2000872 | 38858.9 |
| mandelate racemase/muconate lactonizing enzyme family protein | PHEP_RS08470 | Not Available | Positive | 2000958 - 2002247 | 48041.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
