Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | PHEP_RS08315 | Not Available | Negative | 1965607 - 1966182 | 22263.3 |
| hypothetical protein | PHEP_RS08325 | Not Available | Positive | 1967090 - 1967461 | 14495.4 |
| hypothetical protein | PHEP_RS08330 | Not Available | Positive | 1967579 - 1968007 | 16426.0 |
| hypothetical protein | PHEP_RS08335 | Not Available | Negative | 1968225 - 1968407 | 6617.08 |
| zeta toxin family protein | PHEP_RS08340 | Not Available | Negative | 1968404 - 1968976 | 21373.9 |
| hypothetical protein | PHEP_RS08345 | Not Available | Negative | 1968969 - 1969154 | 6984.5 |
| rna recognition motif domain-containing protein | PHEP_RS08350 | Not Available | Negative | 1969277 - 1969537 | 9763.96 |
| helix-turn-helix transcriptional regulator | PHEP_RS21560 | Not Available | Positive | 1969764 - 1970708 | 35410.2 |
| hypothetical protein | PHEP_RS08360 | Not Available | Positive | 1970906 - 1975927 | 184152.0 |
| hypothetical protein | PHEP_RS08365 | Not Available | Positive | 1975945 - 1979958 | 149803.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
