Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | PHEP_RS08265 | Not Available | Positive | 1952872 - 1953843 | 36975.9 |
| crp/fnr family transcriptional regulator | PHEP_RS08270 | Not Available | Positive | 1954046 - 1954696 | 25191.6 |
| hypothetical protein | PHEP_RS08275 | Not Available | Positive | 1954853 - 1955326 | 18430.0 |
| maue/doxx family redox-associated membrane protein | PHEP_RS08280 | Not Available | Positive | 1955632 - 1956102 | 17836.5 |
| hypothetical protein | PHEP_RS08285 | Not Available | Positive | 1956195 - 1956443 | 8785.37 |
| hypothetical protein | PHEP_RS08290 | Not Available | Positive | 1956518 - 1957579 | 41256.2 |
| thioredoxin family protein | PHEP_RS08295 | Not Available | Negative | 1957583 - 1959097 | 58039.4 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS08300 | Not Available | Negative | 1959121 - 1960515 | 52434.7 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS08305 | Not Available | Negative | 1960526 - 1963867 | 122771.0 |
| fecr family protein | PHEP_RS08310 | Not Available | Negative | 1964151 - 1965377 | 45380.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
