Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS08170 | Not Available | Positive | 1933914 - 1935224 | 48888.3 |
| gnat family n-acetyltransferase | PHEP_RS08175 | Not Available | Negative | 1935221 - 1935664 | 16907.3 |
| yajq family cyclic di-gmp-binding protein | PHEP_RS08180 | Not Available | Negative | 1935726 - 1936217 | 18345.2 |
| hypothetical protein | PHEP_RS22175 | Not Available | Positive | 1936357 - 1937199 | 28027.4 |
| polyphosphate kinase 1 | PHEP_RS08190 | Not Available | Positive | 1937318 - 1939372 | 79540.9 |
| hypothetical protein | PHEP_RS08195 | Not Available | Positive | 1939377 - 1940273 | 33391.6 |
| 4'-phosphopantetheinyl transferase superfamily protein | PHEP_RS08200 | Not Available | Negative | 1940264 - 1940734 | 17869.5 |
| acyl carrier protein | PHEP_RS08205 | Not Available | Negative | 1940721 - 1940984 | 9776.73 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | PHEP_RS08210 | Not Available | Negative | 1940977 - 1942254 | 44914.9 |
| 3-hydroxyacyl-acp dehydratase fabz family protein | PHEP_RS08215 | Not Available | Negative | 1942247 - 1942693 | 16073.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
